Monday, January 19, 2015

CRAN-R_RefreshPart4

Hi,

This is the next refresh on R, previously we saw many packages but now I give one single script.
On Windows it is better to run under RStudio:
#devtools from RStudio
install.packages("devtools") ;
library("devtools") ;
#Rserve interface
install.packages("Rserve") ;
#Rcmdr
install.packages("Rcmdr", dependencies=TRUE) ;
install.packages(c("car","MASS","nnet","XLConnect")) ;
#plyr Get the released version from CRAN
install.packages("plyr") ;
#plyr Get the development version from github
devtools::install_github("hadley/plyr") ;
#dplyr Get the released version from CRAN
install.packages("dplyr") ;
devtools::install_github("hadley/lazyeval") ;
devtools::install_github("hadley/dplyr") ;
install.packages(c("nycflights13", "Lahman")) ;
#reshape
install.packages("reshape") ;
install.packages("reshape2") ;
#iplots
install.packages("iplots") ;
#iplots eXtreme: Acynomix
install.packages("Acynomix") ;
#ggobi
source("http://www.ggobi.org/downloads/install.r") ;
#rggobi
install.packages("rggobi") ;
#google CausalImpact
devtools::install_github("google/CausalImpact") ;
#packrat
install.packages("packrat") ;
devtools::install_github("rstudio/packrat") ;
#knitr
install.packages("knitr", dependencies = TRUE) ;
update.packages(ask = FALSE, repos = 'http://cran.rstudio.org') ;
install.packages("knitr",
                 repos = c("http://rforge.net", "http://cran.rstudio.org"),
                 type = "source") ;
devtools::install_github('yihui/knitr', build_vignettes = TRUE) ;
#rmarkdown
install.packages("rmarkdown") ;
devtools::install_github("rstudio/rmarkdown") ;
#shiny
install.packages("shiny") ;
#ggplot & ggplot2
install.packages("ggplot") ;
install.packages("ggplot2") ;
#ggvis
install.packages("ggvis") ;
#rCharts
devtools::install_github("ramnathv/rCharts") ;
#plotly
install_github("ropensci/plotly") ;
devtools::install_github("ropensci/plotly") ;
#googlevis
install.packages("googleVis") ;
#clickme
devtools::install_github("nachocab/clickme") ;
#gg2v
install.packages("gg2v") ;
devtools::install_github("hadley/gg2v") ;
#vega, rVega
install.packages("Vega","rVega") ;
devtools::install_github("metagraf/rVega") ;
devtools::install_github("rVega", "metagraf") ;
#r2d3
devtools::install_github("jamesthomson/R2D3") ;
#ggmap
install.packages("ggmap") ;
install.packages("pandoc") ;
#biocLite
source("http://bioconductor.org/biocLite.R") ; biocLite() ;
#bioc
source("http://bioconductor.org/getBioC.R") ; getBioC() ;

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